#include <svkLCModelCoordReader.h>

Inheritance diagram for svkLCModelCoordReader:

Public Member Functions
	vtkTypeMacro (svkLCModelCoordReader, svkLCModelReader)

virtual svkImageReader2::ReaderType	GetReaderType ()

virtual int	CanReadFile (const char *fname)

void	SetDataStartDelimiter (string delimiterString)

Public Member Functions inherited from svkLCModelReader
	vtkTypeMacro (svkLCModelReader, svkImageReader2)

virtual const char *	GetDescriptiveName ()

void	SetMRSFileName (string mrsFileName)

void	SetMetName (string metName)

Public Member Functions inherited from svkImageReader2
	vtkTypeMacro (svkImageReader2, vtkImageReader2)

svkImageData *	GetOutput ()

svkImageData *	GetOutput (int)

svkDcmHeader *	GetDcmHeader (const char *fileName)

void	OnlyReadOneInputFile ()

void	OnlyGlobFiles ()

void	GlobFileNames ()

void	OnlyReadHeader (bool onlyReadHeader)

Static Public Member Functions
static svkLCModelCoordReader *	New ()

Static Public Member Functions inherited from svkImageReader2
static string	StripWhite (string in)

static string	RemoveDelimFromDate (string *slashDate, char delimChar= '/')

static string	GetFileRoot (const char *fname)

static string	GetFileExtension (const char *fname)

static string	GetFilePath (const char *fname)

static string	GetFileNameWithoutPath (const char *fname)

static long	GetFileSize (ifstream *fs)

Protected Member Functions
	svkLCModelCoordReader ()

	~svkLCModelCoordReader ()

virtual int	FillOutputPortInformation (int port, vtkInformation *info)

virtual void	ExecuteDataWithInformation (vtkDataObject output, vtkInformation outInfo)

Protected Member Functions inherited from svkLCModelReader
	svkLCModelReader ()

	~svkLCModelReader ()

virtual int	FillInputPortInformation (int port, vtkInformation *info)

virtual void	ExecuteInformation ()

virtual svkDcmHeader::DcmPixelDataFormat	GetFileType ()

string	GetSeriesDescription ()

void	GetVoxelIndexFromFileName (string lcmodelFileName, int col, int row, int *slice)

virtual string	GetFileSeriesDescription (string fileName)

Protected Member Functions inherited from svkImageReader2
	svkImageReader2 ()

	~svkImageReader2 ()

void	SetupOutputInformation ()

void	SetupOutputExtent ()

void	SetupOutputScalarData ()

virtual void	ReadLine (ifstream hdr, istringstream iss)

void	ReadLineIgnore (ifstream hdr, istringstream iss, char delim)

string	ReadLineSubstr (ifstream hdr, istringstream iss, int start, int stop)

string	ReadLineValue (ifstream hdr, istringstream iss, char delim)

int	ReadLineKeyValue (ifstream hdr, istringstream iss, char delim, string key, string value)

virtual void	SetProvenance ()

void	SetReadLength (int length)

Additional Inherited Members
Public Types inherited from svkImageReader2
enum	ReaderType { UNDEFINED = -1, DICOM_MRS =0, DICOM_MRI, DICOM_ENHANCED_MRI, DICOM_SEGMENTATION, DICOM_RAW, SIEMENS_RDA, VARIAN_FID, VARIAN_FDF, GE_PFILE, GE_SDBM, GE_POSTAGE_STAMP, GE_SIGNA_LX2, GE_SIGNA_5X, LC_MODEL_COORD, LC_MODEL_CSV, LC_MODEL_TABLE, VARIABLE_FLIP_DAT, BRUKER_MRS, PHILIPS_S, DDF, IDF, LAST_TYPE = IDF }

Protected Attributes inherited from svkLCModelReader
string	metName

Protected Attributes inherited from svkImageReader2
vtkDataArray *	dataArray

bool	readOneInputFile

bool	onlyGlobFiles

bool	onlyReadHeader

Constructor & Destructor Documentation

svkLCModelCoordReader ( )

protected

~svkLCModelCoordReader ( )

protected

Member Function Documentation

int CanReadFile ( const char * fname )

virtual

Check to see if the extension indicates a UCSF IDF file. If so, try to open the file for reading. If that works, then return a success code. Return Values: 1 if can read the file, 0 otherwise.

void ExecuteDataWithInformation	(	vtkDataObject *	output,
		vtkInformation *	outInfo
	)

protectedvirtual

Side effect of Update() method. Used to load pixel data and initialize vtkImageData Called after ExecuteInformation()

References svkImageData::DeepCopy(), svkImageData::GetDcmHeader(), svkDcmHeader::GetDimensionIndexVector(), svkDcmHeader::GetNumberOfCells(), svkImageReader2::GetOutput(), svkMrsImageData::GetSpectrum(), svkImageReader2::GlobFileNames(), and svkDcmHeader::SetValue().

int FillOutputPortInformation	(	int	port,
		vtkInformation *	info
	)

protectedvirtual

Output is fitted spectra

Reimplemented from svkImageReader2.

virtual svkImageReader2::ReaderType GetReaderType ( )

inlinevirtual

Implements svkImageReader2.

References svkImageReader2::LC_MODEL_COORD.

static svkLCModelCoordReader* New ( )

static

void SetDataStartDelimiter ( string delimiterString )

Set the string to search for within the output "coord" files. The data to load will follow the specfied string, e.g. "phased data points follow" "fit to the data follow"

vtkTypeMacro	(	svkLCModelCoordReader	,
		svkLCModelReader
	)

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Protected Member Functions

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation