svkLCModelReader.h

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/*
 *  Copyright © 2009-2015 The Regents of the University of California.
 *  All Rights Reserved.
 *
 *  Redistribution and use in source and binary forms, with or without 
 *  modification, are permitted provided that the following conditions are met:
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 *      this list of conditions and the following disclaimer.
 *  •   Redistributions in binary form must reproduce the above copyright notice, 
 *      this list of conditions and the following disclaimer in the documentation 
 *      and/or other materials provided with the distribution.
 *  •   None of the names of any campus of the University of California, the name 
 *      "The Regents of the University of California," or the names of any of its 
 *      contributors may be used to endorse or promote products derived from this 
 *      software without specific prior written permission.
 *  
 *  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND 
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 *  WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. 
 *  IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, 
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/*
 *  $URL$
 *  $Rev$
 *  $Author$
 *  $Date$
 *
 *  Authors:
 *      Jason C. Crane, Ph.D.
 *      Beck Olson
 */


#ifndef SVK_LCMODEL_READER_H
#define SVK_LCMODEL_READER_H

#include <vtkInformation.h>
#include <map>
#include <vtkStringArray.h>
#include <string>

#include <svkImageReader2.h>


namespace svk {


class svkLCModelReader : public svkImageReader2 
{

    public:

        vtkTypeMacro( svkLCModelReader, svkImageReader2);

        // Description: 
        // A descriptive name for this format
        virtual const char* GetDescriptiveName() {
            return "LCModel Reader";
        }

        //  Methods:
        void                    SetMRSFileName( string mrsFileName );
        void                    SetMetName( string metName );

    protected:

        svkLCModelReader();
        ~svkLCModelReader();

        virtual int                                 FillInputPortInformation( int port, vtkInformation* info ); 
        virtual void                                ExecuteInformation();
        virtual svkDcmHeader::DcmPixelDataFormat    GetFileType();
        string                                      GetSeriesDescription();
        void                                        GetVoxelIndexFromFileName(string lcmodelFileName, int* col, int* row, int* slice); 
        string                                      metName;
        virtual string                              GetFileSeriesDescription( string fileName ); 



    private:

        //  Methods:
        virtual void                                InitDcmHeader();

        //  Members:
        string                                      mrsFileName;

};


}   //svk


#endif //SVK_LCMODEL_READER_H