svkGESigna5XReader Class Reference

#include <svkGESigna5XReader.h>

Inheritance diagram for svkGESigna5XReader:

Public Member Functions
	vtkTypeMacro (svkGESigna5XReader, svkImageReader2)
virtual int	CanReadFile (const char *fname)
virtual const char *	GetFileExtensions ()
virtual const char *	GetDescriptiveName ()
virtual svkImageReader2::ReaderType	GetReaderType ()
Public Member Functions inherited from svkImageReader2
	vtkTypeMacro (svkImageReader2, vtkImageReader2)
svkImageData *	GetOutput ()
svkImageData *	GetOutput (int)
svkDcmHeader *	GetDcmHeader (const char *fileName)
void	OnlyReadOneInputFile ()
void	OnlyGlobFiles ()
void	GlobFileNames ()
void	OnlyReadHeader (bool onlyReadHeader)

Static Public Member Functions
static svkGESigna5XReader *	New ()
Static Public Member Functions inherited from svkImageReader2
static string	StripWhite (string in)
static string	RemoveDelimFromDate (string *slashDate, char delimChar= '/')
static string	GetFileRoot (const char *fname)
static string	GetFileExtension (const char *fname)
static string	GetFilePath (const char *fname)
static string	GetFileNameWithoutPath (const char *fname)
static long	GetFileSize (ifstream *fs)

Protected Member Functions
	svkGESigna5XReader ()
	~svkGESigna5XReader ()
virtual void	ExecuteInformation ()
virtual void	ExecuteDataWithInformation (vtkDataObject *output, vtkInformation *outInfo)
virtual int	FillOutputPortInformation (int port, vtkInformation *info)
virtual svkDcmHeader::DcmPixelDataFormat	GetFileType ()
virtual GESignaHeader *	ReadHeader (const char *FileNameToRead)
bool	CalculateTopLeftHandCornerAndRowColumnAndNormalVectors (GESignaHeader *hdr, double tlhc[3], double row[3], double column[3], double normal[3])
bool	SortFilesByImagePositionPatient (GESignaHeader *selectedFile, vtkStringArray *fileNames, bool ascending)
bool	CopyGenesisImage (FILE *infp, int width, int height, int compress, short *map_left, short *map_wide, unsigned short *output)
bool	LoadData (const char *filename, unsigned short *outPtr, int *outExt, vtkIdType *)
void	statTimeAndDateToAscii (void *clock, char *time, char *date)
void	InitDcmHeader ()
void	InitEnhancedMRImageModule ()
void	InitPatientModule ()
void	InitGeneralStudyModule ()
void	InitGeneralSeriesModule ()
void	InitGeneralEquipmentModule ()
void	InitEnhancedGeneralEquipmentModule ()
void	InitMultiFrameFunctionalGroupsModule ()
void	InitMRImageAndSpectroscopyInstanceMacro ()
void	InitMRPulseSequenceModule ()
void	InitSharedFunctionalGroupMacros ()
void	InitPixelMeasuresMacro ()
void	InitPlaneOrientationMacro ()
void	InitPixelValueTransformationMacro ()
void	InitPerFrameFunctionalGroupMacros ()
void	InitMRImageFrameTypeMacro ()
void	InitMRTimingAndRelatedParametersMacro ()
void	InitMRFOVGeometryMacro ()
void	InitMREchoMacro ()
void	InitMRModifierMacro ()
void	InitMRImagingModifierMacro ()
void	InitMRReceiveCoilMacro ()
void	InitMRTransmitCoilMacro ()
void	InitMRAveragesMacro ()
Protected Member Functions inherited from svkImageReader2
	svkImageReader2 ()
	~svkImageReader2 ()
void	SetupOutputInformation ()
void	SetupOutputExtent ()
void	SetupOutputScalarData ()
virtual void	ReadLine (ifstream *hdr, istringstream *iss)
void	ReadLineIgnore (ifstream *hdr, istringstream *iss, char delim)
string	ReadLineSubstr (ifstream *hdr, istringstream *iss, int start, int stop)
string	ReadLineValue (ifstream *hdr, istringstream *iss, char delim)
int	ReadLineKeyValue (ifstream *hdr, istringstream *iss, char delim, string *key, string *value)
virtual void	SetProvenance ()
virtual string	GetFileSeriesDescription (string fileName)
void	SetReadLength (int length)

Protected Attributes
int	numFrames
svkDcmHeader::DcmDataOrderingDirection	dataSliceOrder
GESignaHeader *	imageHeader
svkEnhancedMRIIOD *	iod
Protected Attributes inherited from svkImageReader2
vtkDataArray *	dataArray
bool	readOneInputFile
bool	onlyGlobFiles
bool	onlyReadHeader

Additional Inherited Members
Public Types inherited from svkImageReader2
enum	ReaderType {   UNDEFINED = -1, DICOM_MRS =0, DICOM_MRI, DICOM_ENHANCED_MRI,   DICOM_SEGMENTATION, DICOM_RAW, SIEMENS_RDA, VARIAN_FID,   VARIAN_FDF, GE_PFILE, GE_SDBM, GE_POSTAGE_STAMP,   GE_SIGNA_LX2, GE_SIGNA_5X, LC_MODEL_COORD, LC_MODEL_CSV,   LC_MODEL_TABLE, VARIABLE_FLIP_DAT, BRUKER_MRS, PHILIPS_S,   DDF, IDF, LAST_TYPE = IDF }

Detailed Description

This is a SIVIC reader for GE Genesis *.MR Signa 5X files. This class parses a GE MR header to initialize an svkMriImageData object with an svkDcmHeader corresponding to a DICOM Enhanced MRI Storage SOP class (SOP Class UID: 1.2.840.10008.5.1.4.1.1.4).

The ITK itkGE5ImageIO.cxx and VTK vtkGESignaReader.cxx files were used as guides when creating this class. The CopyGenesisImage method is the vtkcopygenesisimage function from vtkGESignaReader.cxx

Constructor & Destructor Documentation

svkGESigna5XReader ( )

protected

References svkGESigna5XReader::imageHeader, and svkGESigna5XReader::numFrames.

~svkGESigna5XReader ( )

protected

References svkGESigna5XReader::imageHeader.

Member Function Documentation

bool CalculateTopLeftHandCornerAndRowColumnAndNormalVectors ( GESignaHeader *  hdr, double  tlhc[3], double  row[3], double  column[3], double  normal[3]  )

protected

References GESignaHeader::MR_A_Bottom_Right_Corner, GESignaHeader::MR_A_Top_Left_Corner, GESignaHeader::MR_A_Top_Right_Corner, GESignaHeader::MR_Image_Pixel_Size_X, GESignaHeader::MR_Image_Pixel_Size_Y, GESignaHeader::MR_R_Bottom_Right_Corner, GESignaHeader::MR_R_Top_Left_Corner, GESignaHeader::MR_R_Top_Right_Corner, GESignaHeader::MR_S_Bottom_Right_Corner, GESignaHeader::MR_S_Top_Left_Corner, GESignaHeader::MR_S_Top_Right_Corner, GESignaHeader::Series_Patient_Entry, and GESignaHeader::Series_Patient_Position.

Referenced by svkGESigna5XReader::InitPerFrameFunctionalGroupMacros(), svkGESigna5XReader::InitPlaneOrientationMacro(), and svkGESigna5XReader::SortFilesByImagePositionPatient().

int CanReadFile ( const char *  fname )

virtual

Reimplemented in svkGESignaLX2Reader.

References GE_SIGNA_5X_MAGIC_NUMBER.

bool CopyGenesisImage ( FILE *  infp, int  width, int  height, int  compress, short *  map_left, short *  map_wide, unsigned short *  output  )

protected

Referenced by svkGESigna5XReader::LoadData().

void ExecuteDataWithInformation ( vtkDataObject *  output, vtkInformation *  outInfo  )

protectedvirtual

Side effect of Update() method. Used to load pixel data and initialize vtkImageData Called after ExecuteInformation()

References svkGESigna5XReader::LoadData().

void ExecuteInformation ( )

protectedvirtual

Side effect of Update() method. Used to load pixel data and initialize vtkImageData Called before ExecuteData()

References svkGESigna5XReader::dataSliceOrder, svkDcmHeader::GetDataDcos(), svkImageData::GetDcmHeader(), svkDcmHeader::GetIntValue(), svkDcmHeader::GetNormalVector(), svkDcmHeader::GetOrigin(), svkImageReader2::GetOutput(), svkDcmHeader::INCREMENT_ALONG_NEG_NORMAL, svkDcmHeader::INCREMENT_ALONG_POS_NORMAL, svkGESigna5XReader::InitDcmHeader(), svkGESigna5XReader::numFrames, svkImageData::SetDcos(), svkDcmHeader::SetSliceOrder(), and svkImageReader2::SetupOutputInformation().

int FillOutputPortInformation ( int  port, vtkInformation *  info  )

protectedvirtual

Reimplemented from svkImageReader2.

virtual const char* GetDescriptiveName ( )

inlinevirtual

Reimplemented in svkGESignaLX2Reader.

virtual const char* GetFileExtensions ( )

inlinevirtual

Reimplemented in svkGESignaLX2Reader.

svkDcmHeader::DcmPixelDataFormat GetFileType ( )

protectedvirtual

Returns the file root without extension

Implements svkImageReader2.

References svkDcmHeader::UNSIGNED_INT_2.

virtual svkImageReader2::ReaderType GetReaderType ( )

inlinevirtual

Implements svkImageReader2.

Reimplemented in svkGESignaLX2Reader.

References svkImageReader2::GE_SIGNA_5X.

void InitDcmHeader ( )

protectedvirtual

Implements svkImageReader2.

References svkImageReader2::GetDcmHeader(), svkImageData::GetDcmHeader(), svkImageReader2::GetFilePath(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkEnhancedMRIIOD::InitDcmHeader(), svkGESigna5XReader::InitEnhancedGeneralEquipmentModule(), svkGESigna5XReader::InitEnhancedMRImageModule(), svkGESigna5XReader::InitGeneralEquipmentModule(), svkGESigna5XReader::InitGeneralSeriesModule(), svkGESigna5XReader::InitGeneralStudyModule(), svkGESigna5XReader::InitMRImageAndSpectroscopyInstanceMacro(), svkGESigna5XReader::InitMRPulseSequenceModule(), svkGESigna5XReader::InitMultiFrameFunctionalGroupsModule(), svkGESigna5XReader::InitPatientModule(), svkGESigna5XReader::iod, GESignaHeader::MR_Image_Matrix_Size_X, GESignaHeader::MR_Image_Matrix_Size_Y, GESignaHeader::MR_Number_Of_Slices, GESignaHeader::MR_Plane_Type, svkEnhancedMRIIOD::New(), svkGESigna5XReader::ReadHeader(), svkIOD::SetDcmHeader(), svkIOD::SetReplaceOldElements(), svkDcmHeader::SetValue(), and svkGESigna5XReader::SortFilesByImagePositionPatient().

Referenced by svkGESigna5XReader::ExecuteInformation().

void InitEnhancedGeneralEquipmentModule ( )

protected

initialize

References GESignaHeader::Exam_Software_Version, GESignaHeader::Exam_Unique_System_ID, svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::SetValue(), and GESignaHeader::Suite_Product_ID.

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitEnhancedMRImageModule ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitGeneralEquipmentModule ( )

protected

References GESignaHeader::Exam_Hospital_Name, GESignaHeader::Exam_System_ID, svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitGeneralSeriesModule ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::Series_Description, GESignaHeader::Series_Number, GESignaHeader::Series_Patient_Entry, GESignaHeader::Series_Patient_Position, GESignaHeader::Series_Scan_Potocol_Name, GESignaHeader::Series_Time_Stamp_Date, GESignaHeader::Series_Time_Stamp_Time, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitGeneralStudyModule ( )

protected

References GESignaHeader::Exam_Description, GESignaHeader::Exam_Number, GESignaHeader::Exam_Operator, GESignaHeader::Exam_Radiologist, GESignaHeader::Exam_Referring_Physician, GESignaHeader::Exam_Requisition_Number, GESignaHeader::Exam_Time_Stamp_Date, GESignaHeader::Exam_Time_Stamp_Time, svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitMRAveragesMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, and GESignaHeader::MR_Number_Of_Averages.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMREchoMacro ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitMREchoMacro(), and GESignaHeader::MR_Pulse_Echo_Time.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRFOVGeometryMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::MR_FOV_Y, GESignaHeader::MR_Frequency_Direction, GESignaHeader::MR_Image_Dimension_X, GESignaHeader::MR_Image_Dimension_Y, GESignaHeader::MR_Imaging_Mode, GESignaHeader::MR_Number_Of_Averages, GESignaHeader::MR_Number_Of_Slices, GESignaHeader::MR_Pulse_Repetition_Time, GESignaHeader::MR_Scan_Duration, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRImageAndSpectroscopyInstanceMacro ( )

protected

References GESignaHeader::Exam_Magnet_Strength, svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::MR_Center_Frequency, GESignaHeader::MR_Scan_Duration, GESignaHeader::MR_Time_Stamp_Date, GESignaHeader::MR_Time_Stamp_Time, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitMRImageFrameTypeMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::MR_Image_Type, GESignaHeader::MR_Projection_Algorithm, GESignaHeader::MR_Pulse_Sequence, GESignaHeader::MR_Vascular_Collapse, GESignaHeader::Series_Type, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRImagingModifierMacro ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitMRImagingModifierMacro(), GESignaHeader::MR_Center_Frequency, GESignaHeader::MR_Image_Dimension_X, and GESignaHeader::MR_Variable_Bandwidth.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRModifierMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitMRModifierMacro(), GESignaHeader::MR_Fractional_Echo_Flag, GESignaHeader::MR_Image_Dimension_X, GESignaHeader::MR_Imaging_Options, GESignaHeader::MR_Pulse_Inversion_Time, and GESignaHeader::MR_Pulse_Sequence.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRPulseSequenceModule ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::MR_Fat_Water_SAT, GESignaHeader::MR_Imaging_Mode, GESignaHeader::MR_Imaging_Options, GESignaHeader::MR_Pulse_Sequence, GESignaHeader::MR_Pulse_Sequence_Name, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitMRReceiveCoilMacro ( )

protected

Should work for single vs multi-coil, but will not currently differentiate between volume, surface, body coils

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, and GESignaHeader::MR_Receive_Coil_Name.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRTimingAndRelatedParametersMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitMRTimingAndRelatedParametersMacro(), GESignaHeader::MR_Echo_Train_Length, GESignaHeader::MR_Number_Of_Echoes, GESignaHeader::MR_Pulse_Repetition_Time, and GESignaHeader::MR_Pulse_Sequence.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMRTransmitCoilMacro ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitMRTransmitCoilMacro(), and GESignaHeader::MR_Receive_Coil_Name.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitMultiFrameFunctionalGroupsModule ( )

protected

References svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkGESigna5XReader::InitPerFrameFunctionalGroupMacros(), svkGESigna5XReader::InitSharedFunctionalGroupMacros(), GESignaHeader::MR_Timestamp_Of_Last_Change_Date, GESignaHeader::MR_Timestamp_Of_Last_Change_Time, svkGESigna5XReader::numFrames, and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitPatientModule ( )

protected

References GESignaHeader::Exam_Patient_Age, GESignaHeader::Exam_Patient_Age_Notation, GESignaHeader::Exam_Patient_History, GESignaHeader::Exam_Patient_ID, GESignaHeader::Exam_Patient_Name, GESignaHeader::Exam_Patient_Sex, GESignaHeader::Exam_Patient_Weight_In_Grams, svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::SetDcmPatientName(), and svkDcmHeader::SetValue().

Referenced by svkGESigna5XReader::InitDcmHeader().

void InitPerFrameFunctionalGroupMacros ( )

protected

References svkGESigna5XReader::CalculateTopLeftHandCornerAndRowColumnAndNormalVectors(), svkImageData::GetDcmHeader(), svkDcmHeader::GetDimensionIndexVector(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, svkDcmHeader::InitPerFrameFunctionalGroupSequence(), GESignaHeader::MR_Image_Pixel_Size_X, GESignaHeader::MR_Image_Pixel_Size_Y, GESignaHeader::MR_Slice_Thickness, svkGESigna5XReader::ReadHeader(), svkDcmHeader::SetDimensionVectorValue(), and svkDcmHeader::SLICE_INDEX.

Referenced by svkGESigna5XReader::InitMultiFrameFunctionalGroupsModule().

void InitPixelMeasuresMacro ( )

protected

Pixel Spacing:

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), svkGESigna5XReader::imageHeader, GESignaHeader::MR_Image_Pixel_Size_X, GESignaHeader::MR_Image_Pixel_Size_Y, and GESignaHeader::MR_Slice_Thickness.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitPixelValueTransformationMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkImageData::GetDcmHeader(), and svkImageReader2::GetOutput().

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitPlaneOrientationMacro ( )

protected

References svkDcmHeader::AddSequenceItemElement(), svkGESigna5XReader::CalculateTopLeftHandCornerAndRowColumnAndNormalVectors(), svkImageData::GetDcmHeader(), svkImageReader2::GetOutput(), and svkGESigna5XReader::imageHeader.

Referenced by svkGESigna5XReader::InitSharedFunctionalGroupMacros().

void InitSharedFunctionalGroupMacros ( )

protected

References svkGESigna5XReader::InitMRAveragesMacro(), svkGESigna5XReader::InitMREchoMacro(), svkGESigna5XReader::InitMRFOVGeometryMacro(), svkGESigna5XReader::InitMRImageFrameTypeMacro(), svkGESigna5XReader::InitMRImagingModifierMacro(), svkGESigna5XReader::InitMRModifierMacro(), svkGESigna5XReader::InitMRReceiveCoilMacro(), svkGESigna5XReader::InitMRTimingAndRelatedParametersMacro(), svkGESigna5XReader::InitMRTransmitCoilMacro(), svkGESigna5XReader::InitPixelMeasuresMacro(), svkGESigna5XReader::InitPixelValueTransformationMacro(), and svkGESigna5XReader::InitPlaneOrientationMacro().

Referenced by svkGESigna5XReader::InitMultiFrameFunctionalGroupsModule().

bool LoadData ( const char *  filename, unsigned short *  outPtr, int *  outExt, vtkIdType *    )

protected

References svkGESigna5XReader::CopyGenesisImage(), and GE_SIGNA_5X_MAGIC_NUMBER.

Referenced by svkGESigna5XReader::ExecuteDataWithInformation().

static svkGESigna5XReader* New ( )

static

Referenced by svkImageReaderFactory::CreateImageReader2(), and svkImageReaderFactory::svkImageReaderFactory().

GESignaHeader * ReadHeader ( const char *  FileNameToRead )

protectedvirtual

Reimplemented in svkGESignaLX2Reader.

References GEImageMainHeader::Background_Shade, GEImageMainHeader::Bottom_Offset, GEImageMainHeader::Checksum, GEImageMainHeader::Compressed, GEImageMainHeader::Depth, GEImageMainHeader::Dlevel, GEImageMainHeader::Dwindow, GESignaHeader::Exam_Description, GESignaHeader::Exam_Hospital_Name, GESignaHeader::Exam_Magnet_Strength, GESignaHeader::Exam_Number, GESignaHeader::Exam_Operator, GESignaHeader::Exam_Patient_Age, GESignaHeader::Exam_Patient_Age_Notation, GESignaHeader::Exam_Patient_History, GESignaHeader::Exam_Patient_ID, GESignaHeader::Exam_Patient_Name, GESignaHeader::Exam_Patient_Sex, GESignaHeader::Exam_Patient_Weight_In_Grams, GESignaHeader::Exam_Radiologist, GESignaHeader::Exam_Referring_Physician, GESignaHeader::Exam_Requisition_Number, GESignaHeader::Exam_Software_Version, GESignaHeader::Exam_System_ID, GESignaHeader::Exam_Time_Stamp, GESignaHeader::Exam_Time_Stamp_Date, GESignaHeader::Exam_Time_Stamp_Time, GESignaHeader::Exam_Type, GESignaHeader::Exam_Unique_System_ID, GE_SIGNA_5X_MAGIC_NUMBER, GE_VERSION_FIX, GEImageMainHeader::Header_Length, GEImageMainHeader::Height, GEImageMainHeader::Length_Compress, GEImageMainHeader::Length_DBHeader, GEImageMainHeader::Length_Exam, GEImageMainHeader::Length_Graphics, GEImageMainHeader::Length_Histogram, GEImageMainHeader::Length_ID, GEImageMainHeader::Length_Image, GEImageMainHeader::Length_Series, GEImageMainHeader::Length_Suite, GEImageMainHeader::Length_Text, GEImageMainHeader::Length_Unpack, GEImageMainHeader::Length_User, GEImageMainHeader::Level_Offset, GEImageMainHeader::Magic_Number, GESignaHeader::mainHeader, GESignaHeader::MR_A_Bottom_Right_Corner, GESignaHeader::MR_A_Normal, GESignaHeader::MR_A_Top_Left_Corner, GESignaHeader::MR_A_Top_Right_Corner, GESignaHeader::MR_Average_SAR, GESignaHeader::MR_Bitmap_Of_Saturation_Selections, GESignaHeader::MR_Cardiac_Heart_Rate, GESignaHeader::MR_Center_Frequency, GESignaHeader::MR_Echo_Number, GESignaHeader::MR_Echo_Train_Length, GESignaHeader::MR_Fat_Water_SAT, GESignaHeader::MR_Flip_Angle, GESignaHeader::MR_FOV_X, GESignaHeader::MR_FOV_Y, GESignaHeader::MR_Fractional_Echo_Flag, GESignaHeader::MR_Frequency_Direction, GESignaHeader::MR_Image_Contrast_Mode, GESignaHeader::MR_Image_Dimension_X, GESignaHeader::MR_Image_Dimension_Y, GESignaHeader::MR_Image_Location, GESignaHeader::MR_Image_Matrix_Size_X, GESignaHeader::MR_Image_Matrix_Size_Y, GESignaHeader::MR_Image_Number, GESignaHeader::MR_Image_Pixel_Size_X, GESignaHeader::MR_Image_Pixel_Size_Y, GESignaHeader::MR_Image_Type, GESignaHeader::MR_Images_Per_Cardiac_Cycle, GESignaHeader::MR_Imaging_Mode, GESignaHeader::MR_Imaging_Options, GESignaHeader::MR_IV_Contrast_Agent, GESignaHeader::MR_Number_Of_Averages, GESignaHeader::MR_Number_Of_Echoes, GESignaHeader::MR_Number_Of_Slices, GESignaHeader::MR_Oral_Contrast_Agent, GESignaHeader::MR_Plane_Type, GESignaHeader::MR_Preparatory_Pulse_Option, GESignaHeader::MR_Projection_Algorithm, GESignaHeader::MR_Pulse_Echo_Time, GESignaHeader::MR_Pulse_Inversion_Time, GESignaHeader::MR_Pulse_Repetition_Time, GESignaHeader::MR_Pulse_Sequence, GESignaHeader::MR_Pulse_Sequence_Name, GESignaHeader::MR_R_Bottom_Right_Corner, GESignaHeader::MR_R_Normal, GESignaHeader::MR_R_Top_Left_Corner, GESignaHeader::MR_R_Top_Right_Corner, GESignaHeader::MR_Raw_Data_Run_Number, GESignaHeader::MR_Receive_Coil_Name, GESignaHeader::MR_S_Bottom_Right_Corner, GESignaHeader::MR_S_Normal, GESignaHeader::MR_S_Top_Left_Corner, GESignaHeader::MR_S_Top_Right_Corner, GESignaHeader::MR_Scan_Duration, GESignaHeader::MR_Slice_Spacing, GESignaHeader::MR_Slice_Thickness, GESignaHeader::MR_Surface_Coil_Intensity_Correction, GESignaHeader::MR_Time_Stamp, GESignaHeader::MR_Time_Stamp_Date, GESignaHeader::MR_Time_Stamp_Time, GESignaHeader::MR_Timestamp_Of_Last_Change, GESignaHeader::MR_Timestamp_Of_Last_Change_Date, GESignaHeader::MR_Timestamp_Of_Last_Change_Time, GESignaHeader::MR_Trigger_Window, GESignaHeader::MR_Variable_Bandwidth, GESignaHeader::MR_Vascular_Collapse, GEImageMainHeader::Overflow, GEImageMainHeader::Pointer_Compress, GEImageMainHeader::Pointer_DBHeader, GEImageMainHeader::Pointer_Exam, GEImageMainHeader::Pointer_Graphics, GEImageMainHeader::Pointer_Histogram, GEImageMainHeader::Pointer_ID, GEImageMainHeader::Pointer_Image, GEImageMainHeader::Pointer_Series, GEImageMainHeader::Pointer_Suite, GEImageMainHeader::Pointer_Text, GEImageMainHeader::Pointer_Unpack, GEImageMainHeader::Pointer_User, GESignaHeader::Series_Description, GESignaHeader::Series_Number, GESignaHeader::Series_Patient_Entry, GESignaHeader::Series_Patient_Position, GESignaHeader::Series_Scan_Potocol_Name, GESignaHeader::Series_Time_Stamp, GESignaHeader::Series_Time_Stamp_Date, GESignaHeader::Series_Time_Stamp_Time, GESignaHeader::Series_Type, svkGESigna5XReader::statTimeAndDateToAscii(), GESignaHeader::Suite_Product_ID, GEImageMainHeader::Top_Offset, GEImageMainHeader::Underflow, GEImageMainHeader::Version, and GEImageMainHeader::Width.

Referenced by svkGESigna5XReader::InitDcmHeader(), svkGESigna5XReader::InitPerFrameFunctionalGroupMacros(), and svkGESigna5XReader::SortFilesByImagePositionPatient().

bool SortFilesByImagePositionPatient ( GESignaHeader *  selectedFile, vtkStringArray *  fileNames, bool  ascending  )

protected

Sort the list of files in either ascending or descending order by ImagePositionPatient and Series ID. If the Series ID is not the same as the input, the file is removed from the list. Also return true if this is a multi-volume series.

References svkGESigna5XReader::CalculateTopLeftHandCornerAndRowColumnAndNormalVectors(), GESignaHeader::Exam_Number, svkGESigna5XReader::ReadHeader(), and GESignaHeader::Series_Number.

Referenced by svkGESigna5XReader::InitDcmHeader().

void statTimeAndDateToAscii ( void *  clock, char *  time, char *  date  )

protected

Referenced by svkGESignaLX2Reader::ReadHeader(), and svkGESigna5XReader::ReadHeader().

vtkTypeMacro	(	svkGESigna5XReader	,
		svkImageReader2
	)

Member Data Documentation

svkDcmHeader::DcmDataOrderingDirection dataSliceOrder

protected

Referenced by svkGESigna5XReader::ExecuteInformation().

GESignaHeader* imageHeader

protected

Referenced by svkGESigna5XReader::InitDcmHeader(), svkGESigna5XReader::InitEnhancedGeneralEquipmentModule(), svkGESigna5XReader::InitGeneralEquipmentModule(), svkGESigna5XReader::InitGeneralSeriesModule(), svkGESigna5XReader::InitGeneralStudyModule(), svkGESigna5XReader::InitMRAveragesMacro(), svkGESigna5XReader::InitMREchoMacro(), svkGESigna5XReader::InitMRFOVGeometryMacro(), svkGESigna5XReader::InitMRImageAndSpectroscopyInstanceMacro(), svkGESigna5XReader::InitMRImageFrameTypeMacro(), svkGESigna5XReader::InitMRImagingModifierMacro(), svkGESigna5XReader::InitMRModifierMacro(), svkGESigna5XReader::InitMRPulseSequenceModule(), svkGESigna5XReader::InitMRReceiveCoilMacro(), svkGESigna5XReader::InitMRTimingAndRelatedParametersMacro(), svkGESigna5XReader::InitMRTransmitCoilMacro(), svkGESigna5XReader::InitMultiFrameFunctionalGroupsModule(), svkGESigna5XReader::InitPatientModule(), svkGESigna5XReader::InitPerFrameFunctionalGroupMacros(), svkGESigna5XReader::InitPixelMeasuresMacro(), svkGESigna5XReader::InitPlaneOrientationMacro(), svkGESigna5XReader::svkGESigna5XReader(), svkGESignaLX2Reader::svkGESignaLX2Reader(), svkGESigna5XReader::~svkGESigna5XReader(), and svkGESignaLX2Reader::~svkGESignaLX2Reader().

svkEnhancedMRIIOD* iod

protected

Referenced by svkGESigna5XReader::InitDcmHeader().

int numFrames

protected

Referenced by svkGESigna5XReader::ExecuteInformation(), svkGESigna5XReader::InitMultiFrameFunctionalGroupsModule(), svkGESigna5XReader::svkGESigna5XReader(), and svkGESignaLX2Reader::svkGESignaLX2Reader().

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The documentation for this class was generated from the following files:

• svkGESigna5XReader.h
• svkGESigna5XReader.cc