svkMRSZeroOrderPhase.h

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/*
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/*
 *  $URL$
 *  $Rev$
 *  $Author$
 *  $Date$
 *
 *  Authors:
 *      Jason C. Crane, Ph.D.
 *      Beck Olson
 */


#ifndef SVK_MRS_FIRST_ORDER_PHASE_H
#define SVK_MRS_FIRST_ORDER_PHASE_H

#include <itkParticleSwarmOptimizer.h>
#include <svkMRSAutoPhase.h>
#include <svkMRSPeakPick.h>


namespace svk {


using namespace std;


class svkMRSZeroOrderPhase : public svkMRSAutoPhase

{

    public:

        vtkTypeMacro( svkMRSZeroOrderPhase, svkMRSAutoPhase );
        static          svkMRSZeroOrderPhase* New();
        

    protected:

        svkMRSZeroOrderPhase();
        ~svkMRSZeroOrderPhase();

        virtual void    ValidateInput(); 

        virtual void    FitPhase( int cellID ); 
        virtual void    PrePhaseSetup();
        virtual void    PostPhaseCleanup(); 
        int             GetLargestZeroOrderPhasePeak( ); 
        int             RequestData( 
                                    vtkInformation* request, 
                                    vtkInformationVector** inputVector, 
                                    vtkInformationVector* outputVector ); 



    private:

#ifdef SWARM
        virtual void    InitOptimizer( int cellID, itk::ParticleSwarmOptimizer::Pointer itkOptimizer ); 
#else
        virtual void    InitOptimizer( int cellID, itk::PowellOptimizer::Pointer itkOptimizer ); 
#endif

        svkMRSPeakPick* peakPicker;
        void            InitPeakPicker( ); 

        

};


}   //svk


#endif //SVK_MRS_FIRST_ORDER_PHASE_H